Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922602.1_cds_XP_016471358.1_63709
CDS Infomation

[gene=LOC107793504] [db_xref=GeneID:107793504] [protein=putative pentatricopeptide repeat-containing protein At5g65820] [protein_id=XP_016471358.1] [location=complement(join(17483..19086,19206..19458))] [gbkey=CDS]
Sequence

ATGTTGAGAAGTATCAGTCTTTTGCCTTCATCACTGAGCCTCCGTGCAGCATCTTCACTG
CACATTCTACCGGAAATGGCCTCAAAGGGTAAATCTTTTTTACACTCTGAGTCAACCCTT
TTAAATTCTTCCAATAATCATGATGAATTTTCAGCTGATGTAGAGAAGGTTTATAGAATT
TTGAGAAAGTTTCACTCAAGGGTTCCAAAACTTGAGCTTGCTTTGCAAGAATCTGGTATC
CTGGTACGTTCAGGCTTGACCGAACGTGTGTTGAGTCGTTGTGGTGATGCTGGGAATTTA
GGCTACAGATTCTTTGTATGGGCCTCAAAGCAACCTGGTTATAGGCATAGTCATGATACA
TACAAATCAATGGTCAAGATTTTGGGGAAAATGAGGCAGTTTGGTACTGTATGGGCACTT
GTTGAGGAGATGAGGAGAGAGAATCCTCAGTTTTTGACACCAGAACTGTTTATTGTATTG
ATGAGGAGATTTGCCTCAGCTAGAATGGTAAAGAAAGCGATCCAAGTGTTGGATGAGATG
CCCAAATATGGTTGTGAGCCAGATGACTATGTTTTCGGGTGTTTGTTGGATGCTTTGTGT
AAGAATGGTAGCGTAAAAGAGGCAGCTGTATTGTTTGACGAAATGAGGATTAGGTTTAGC
CCTACCATAAAGCATTTTACTTCATTGTTATATGGTTGGTGTAAAGAAGGGAAGCTTATG
GAGGCGAAAGTCGTGTTGGTGAAAATGAGGGAGGCAGGTTTCGAGCCAGACATTGTGGTT
TATAACAACTTGCTCAATGGTTATGCAGTGTCTAGGAAAATGGCTGATGCATTTGATCTT
CTGCAGGAGATGAGAAGAAAAGGTTGCAACCCTAATGCAACTTCTTATACAATAGTAATT
CAGGCGCTTTGTTCGCAAGACAAGATGGAGGAAGCTATGCGGATATTCTTGGATATGGAG
AGAAGCGGATGTGAAGCTGATGTTGTGACGTATACTACCTTGATAAGTGGATTTTGTAAG
TGGGGAAAGATTGAAAAAGGTTATGAACTTCTGGATAATATGCTGCAGAAAGGGTATAAT
CCAAATCAGACTACTTATTTGCATATAATGTTAGCCCATGAGAAGAAGGAAGAGTTGGAA
GAGTGTTTGGAACTTGTTAAGGAAATGGAAAATATCTGTATACCTCCTGACCTTAGCATC
TATAATACAGTAATTCGGTTAGCTTGTAAATTGGGGGAAATTGATGAAGCTGTGCAAGCA
TGGAACCAAATAGAAGCGAACGGGATCAGTCCGGGGGTTGACACCTTTGTCATTATGATT
AATGGTTGTGTTGATCAAGGGCGTCTAATAGAAGCTTGTGATTACTTTAAAGAAATGATC
GGACGAGGTCTTCTGTCTGCTCCTCAATATGGTACTCTGAAGGACCTGTTGAATACTTTG
TTACGAGCAGAGAAACTTGAACTAGGTAAAGATGTCTGGAGTTGCATAATGACCAAAGGA
TGTGAGCTTAATGCGTATGCATGGACCATTTGGATTCATGCATTGTTTTCAAATGGACAT
GTGAAAGAGGCTTGTTCGTACTGTTTAGATATGATGGATGCCGGTTTGATGCCTCAGCCA
GACACGTTTGCTAAGCTTATGTGGGGTCTAAGGAAGCTTTATAATAGACAGATTGCTGCA
GAGATTACAGAGAAGGTGAGAAAAATGGCCGCAGAGAGAAATATGACTTTCAAGATGTAC
AAGCGACGTGGTGAAAGAGACTTGACAGAAAAAGCTAAGGCAAAACTGGATGGGAGAAAG
AGGAGAGCTCGTCGACGCCGTTGGGGTAGCCATCGTAGGCAGGCTAACACTTTATGA

Peptide Sequence

PEP ID

XP_016471358.1
PEP Infomation

PREDICTED: putative pentatricopeptide repeat-containing protein At5g65820 [Nicotiana tabacum]
Sequence

MLRSISLLPSSLSLRAASSLHILPEMASKGKSFLHSESTLLNSSNNHDEFSADVEKVYRI
LRKFHSRVPKLELALQESGILVRSGLTERVLSRCGDAGNLGYRFFVWASKQPGYRHSHDT
YKSMVKILGKMRQFGTVWALVEEMRRENPQFLTPELFIVLMRRFASARMVKKAIQVLDEM
PKYGCEPDDYVFGCLLDALCKNGSVKEAAVLFDEMRIRFSPTIKHFTSLLYGWCKEGKLM
EAKVVLVKMREAGFEPDIVVYNNLLNGYAVSRKMADAFDLLQEMRRKGCNPNATSYTIVI
QALCSQDKMEEAMRIFLDMERSGCEADVVTYTTLISGFCKWGKIEKGYELLDNMLQKGYN
PNQTTYLHIMLAHEKKEELEECLELVKEMENICIPPDLSIYNTVIRLACKLGEIDEAVQA
WNQIEANGISPGVDTFVIMINGCVDQGRLIEACDYFKEMIGRGLLSAPQYGTLKDLLNTL
LRAEKLELGKDVWSCIMTKGCELNAYAWTIWIHALFSNGHVKEACSYCLDMMDAGLMPQP
DTFAKLMWGLRKLYNRQIAAEITEKVRKMAAERNMTFKMYKRRGERDLTEKAKAKLDGRK
RRARRRRWGSHRRQANTL

Transcript Sequence

Gene sequence data has not been registered.